Should I get the 2.5 inch or the 3.5 one?
If you have the space and mountings in the case then 3.5 naturally. larger drive offers more bang for the buck and that's the most important part when thinking about bulk storage after, storage size and reliability. Things like reliability, noise, write and read speed are more of a question about the model and manufacturer, not the drive dimensions. IMO things like energy consumption when thinking about hard-drives in a PC build are irrelevant, but there 2.5 inch might shine.